A small example qseaSet with 5 paired tumour/normal samples.

A qseaSet object containing a small region of chromosome 7 for 5 paired tumour/normal samples (commercially bought from Origene and processed within CRUK-MI CBC).

exampleTumourNormal

Format

A qseaSet object with 819 regions and 10 samples:

Examples

data("exampleTumourNormal", package = "mesa")
exampleTumourNormal
#> qseaSet
#> =======================================
#> 10 Samples: 
#> Colon1_N, Colon1_T, Colon2_N, Colon2_T, Lung1_N, Lung1_T, Lung2_N, Lung2_T, Lung3_N, Lung3_T
#> 819 Regions in 22 chromosomes of BSgenome.Hsapiens.NCBI.GRCh38
qsea::getSampleNames(exampleTumourNormal)
#>  [1] "Colon1_N" "Colon1_T" "Colon2_N" "Colon2_T" "Lung1_N"  "Lung1_T" 
#>  [7] "Lung2_N"  "Lung2_T"  "Lung3_N"  "Lung3_T"