Get TxDb for current or specified genome

getMesaTxDb(genome = NULL)

Arguments

genome: Genome build, defaults to current setting

Value

A TxDb object for the specified genome

Examples

if (requireNamespace("TxDb.Hsapiens.UCSC.hg38.knownGene", quietly = TRUE)) {
    getMesaTxDb("hg38")
}
#> TxDb object:
#> # Db type: TxDb
#> # Supporting package: GenomicFeatures
#> # Data source: UCSC
#> # Genome: hg38
#> # Organism: Homo sapiens
#> # Taxonomy ID: 9606
#> # UCSC Table: knownGene
#> # UCSC Track: GENCODE V48
#> # Resource URL: https://genome.ucsc.edu/
#> # Type of Gene ID: Entrez Gene ID
#> # Full dataset: yes
#> # Nb of transcripts: 412044
#> # Db created by: txdbmaker package from Bioconductor
#> # Creation time: 2025-10-06 16:41:53 +0000 (Mon, 06 Oct 2025)
#> # txdbmaker version at creation time: 1.5.6
#> # RSQLite version at creation time: 2.4.3
#> # DBSCHEMAVERSION: 1.2